H23LNBCXX_l02n01_bir_0113_pa_23.35100000043a22.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l02n01_bir_0113_pa_23.35100000043a22.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	196256
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	4020	2.0483450187510193	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	1120	0.5706831893037665	No Hit
TTGTAGTACTTGGCTGATTCTTTCTCATAACGTGTGAGGTTATTTTTGAAA	249	0.1268751019077124	No Hit
GTTACAAAAACAGATTCGGACTCTATTACGTCGATTTCAAAAATAACCTCA	214	0.10904125224196967	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCG	209	0.10649355943257786	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	199	0.10139817381379422	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	199	0.10139817381379422	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	400	0.0	43.309803	45
GCCATCC	30	1.1368925E-4	37.497665	23
TCGCGCG	30	1.1368925E-4	37.497665	9
ACTTGGC	90	0.0	32.497974	8
GTCGCGC	35	2.8129455E-4	32.140854	8
ATGCCGT	555	0.0	31.619654	44
TATGCCG	575	0.0	30.12856	43
GTATGCC	580	0.0	29.86883	42
TATCTCG	575	0.0	29.73728	36
CGTATGC	585	0.0	29.613543	41
ACGTGTG	100	1.8189894E-12	29.248178	30
GTGAGGT	100	1.8189894E-12	29.248178	34
TCGTATG	595	0.0	29.115835	40
CCTATCT	590	0.0	28.981247	34
CGAGACT	605	0.0	28.634583	23
ACGAGAC	605	0.0	28.634583	22
GCCCACG	610	0.0	28.399872	18
CACGAGA	610	0.0	28.399872	21
CTCGTAT	615	0.0	28.168978	39
CTAGATC	600	0.0	28.12325	28