H23LNBCXX_l01n01_bir_1228_pcontrolb_75.351000000434af.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pcontrolb_75.351000000434af.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	225869
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	7900	3.4976025926532635	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGT	798	0.35330213530851956	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCG	352	0.15584254590049984	No Hit
GATAAGAACTTACTACAAGACCATACAACGTGGTTTTGGTATCTGTCCATA	275	0.1217519889847655	No Hit
CTCGTAAAACAATCAATGTGATTCATCATATCAGCAAGAGAAAAATCAAGA	264	0.1168819094253749	No Hit
ATACGTATAAGGCCAAATGTAAGGATAGTGAAAAGTGACATCCTCTAAAAA	248	0.10979815733898853	No Hit
ACTTAGTATCCGTTTATTCAACACACATCTAGGTGTATTCCGTAGTTACAT	245	0.1084699538227911	No Hit
ATATAGTCAATGGTACTGTAATAGCACTGAATGGTGACAGATAGTATCTAC	239	0.1058135467903962	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTACA	25	3.8731567E-5	45.01506	1
AGTCCAC	20	7.0173224E-4	45.005096	30
GATCGGA	20	7.0173224E-4	45.005096	21
ACGCAAG	20	7.0173224E-4	45.005096	24
CGTTCAC	20	7.0173224E-4	45.005096	33
TCCTAGC	20	7.0173224E-4	45.005096	28
TCAGCTC	20	7.0173224E-4	45.005096	29
GGGGTTA	20	7.0173224E-4	45.005096	22
AAGTTCG	20	7.0173224E-4	45.005096	5
GCTTACG	20	7.0173224E-4	45.005096	2
CCAACGT	20	7.0173224E-4	45.005096	32
AGAGCGA	20	7.0173224E-4	45.005096	5
AGTCGTC	20	7.0173224E-4	45.005096	33
TACGTAA	20	7.0173224E-4	45.005096	23
GAAGGTT	20	7.0173224E-4	45.005096	4
GTACCGT	30	2.1560518E-6	45.005093	25
CAACGTG	30	2.1560518E-6	45.005093	26
CCAATCG	25	3.878228E-5	45.005093	35
AGGGTCA	25	3.878228E-5	45.005093	32
TTTCCGA	30	2.1560518E-6	45.005093	22