H23LNBCXX_l01n01_bir_1228_pb_84.351000000429d3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_84.351000000429d3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	237852
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGTC	6590	2.7706304760943783	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCG	1740	0.731547348771505	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGCCGT	749	0.3149017035803777	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	386	0.1622857911642534	No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACGTCTTAGTATCTCGTATGC	292	0.1227654171501606	No Hit
ATCTTACAGCATGTGTGTTGGAAGATGAGAAGTTAAAACTGAGTTATAAGA	265	0.11141382035887862	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	250	0.1051073776970553	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	243	0.10216437112153777	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	685	0.0	42.37187	45
ATGCCGT	745	0.0	38.95937	44
GATCGTA	25	0.0021038544	35.99966	25
CGTATGG	25	0.0021038544	35.99966	28
TAGCTTC	50	4.8516085E-8	35.99966	9
CTCTAAT	40	1.5510139E-5	33.76388	1
TATGCCG	890	0.0	32.612057	43
GTATGCC	915	0.0	31.966913	42
CGTATGC	930	0.0	31.209387	41
TCGTATG	940	0.0	30.638012	40
CTCGTAT	945	0.0	30.475904	39
TCTCGTA	955	0.0	30.156788	38
TCTCTCC	30	0.0051393854	29.99972	3
GTAAGAC	30	0.0051393854	29.99972	12
ATCTCGT	985	0.0	29.238306	37
TATCTCG	990	0.0	28.863367	36
GTATCTC	1005	0.0	28.432571	35
TAGTATC	1030	0.0	28.179346	33
TATCAGC	40	6.151994E-4	28.124737	19
ACCGGCG	40	6.151994E-4	28.124737	8