H23LNBCXX_l01n01_bir_1228_pb_78.3510000004290c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_78.3510000004290c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	312521
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	8356	2.6737403246501836	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	1278	0.4089325197346738	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	621	0.19870664691332743	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	477	0.1526297432812515	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	419	0.13407099042944315	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	400	0.1279913989779887	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	393	0.1257515494958739	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	323	0.10335305467472586	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	920	0.0	44.263943	45
ATGCCGT	1075	0.0	38.090992	44
CTAGATG	30	1.1383783E-4	37.497997	37
TATGCCG	1130	0.0	36.037903	43
GTATGCC	1135	0.0	35.680916	42
CGTATGC	1160	0.0	34.911934	41
CTCGTAT	1170	0.0	34.613537	39
TCTCGTA	1185	0.0	34.365257	38
ATCTCGT	1185	0.0	34.175396	37
AATCTCG	1180	0.0	34.129536	36
TCGTATG	1195	0.0	34.07768	40
CAATCTC	1210	0.0	33.283348	35
TGATAGC	35	2.8139472E-4	32.146286	25
CTCACTA	35	2.8139472E-4	32.146286	33
ATACCTA	35	2.8139472E-4	32.146286	6
TACAATC	1285	0.0	31.520874	33
CGAGACT	1315	0.0	31.139023	23
CTGATTA	1315	0.0	30.972885	28
ACAATCT	1315	0.0	30.625744	34
TGATTAC	1325	0.0	30.569298	29