H23LNBCXX_l01n01_bir_1228_pb_77.351000000428e1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_77.351000000428e1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	294690
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	21932	7.442397095252638	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	10326	3.5040211747938512	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	2065	0.7007363670297602	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	359	0.12182293257321253	No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGC	342	0.11605415860735009	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	322	0.10926736570633547	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2380	0.0	44.617306	45
GGACCGT	30	1.13513575E-4	37.51528	6
GTGGAGT	25	0.0020968672	36.026905	1
TCTGGAC	25	0.0021003662	36.01467	3
CGGAAAT	25	0.0021056235	35.996334	39
GACCGGG	25	0.0021056235	35.996334	40
CAGCGTA	35	2.8170052E-4	32.139584	9
ATGCCGT	3360	0.0	31.603924	44
GACAGAC	30	0.005139412	30.002037	31
CCGGGTG	30	0.0051436797	29.996948	42
ACTTGCC	30	0.0051436797	29.996948	8
TGACCGG	30	0.0051436797	29.996948	39
GGTGGCG	30	0.0051436797	29.996948	45
TATGCCG	3545	0.0	29.891174	43
CGTATGC	3585	0.0	29.55766	41
GTATGCC	3600	0.0	29.434504	42
TCTCGTA	3600	0.0	29.434504	38
CTCGTAT	3615	0.0	29.312368	39
ATCTCGT	3630	0.0	29.005312	37
TCGTATG	3655	0.0	28.930025	40