H23LNBCXX_l01n01_bir_1228_pb_76.351000000428c7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_76.351000000428c7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	225755
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGTC	4297	1.9033908440566099	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCGT	660	0.29235232885207413	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGATTACAATCTCGTATGCCG	422	0.18692830723572015	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	400	0.17718322960731767	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	359	0.1590219485725676	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	270	0.11959867998493942	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	240	0.1063099377643906	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	235	0.10409514739429912	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	355	0.0	43.72099	45
ATGCCGT	410	0.0	37.855976	44
TAGACTC	25	0.0021062267	35.99061	9
TAGGCTC	25	0.0021062267	35.99061	10
AATAGGC	25	0.0021062267	35.99061	8
TATGCCG	455	0.0	34.111977	43
CGTATGC	460	0.0	33.741196	41
GTATGCC	475	0.0	33.149246	42
ATCTCGT	475	0.0	32.675686	37
CTCGTAT	475	0.0	32.675686	39
TCTCGTA	475	0.0	32.675686	38
CAATCTC	495	0.0	31.823978	35
AATCTCG	500	0.0	31.041899	36
TCGTATG	520	0.0	30.28056	40
GCATTCG	30	0.005128461	30.012117	22
GACTGAT	525	0.0	30.012117	26
ATAGGCT	30	0.005145162	29.992176	9
GTGGGTA	30	0.005145162	29.992176	11
GCTCATA	30	0.005145162	29.992176	13
CCACGAG	540	0.0	29.588722	20