H23LNBCXX_l01n01_bir_1228_pb_70.3510000004281a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_70.3510000004281a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	311826
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGTC	19743	6.331415597159955	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGT	6390	2.0492197571722692	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCG	991	0.3178054427789857	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	544	0.1744562672772636	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	505	0.1619492922334892	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	366	0.11737315041080604	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	359	0.11512830873628241	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCCGGA	20	7.025494E-4	44.99984	19
TGCCGTC	2090	0.0	44.676872	45
TCGTCAC	25	0.002104796	35.99987	32
AGGGCTC	25	0.002104796	35.99987	10
CCCGGAC	25	0.002104796	35.99987	20
ATGCCGT	2780	0.0	33.668945	44
GTTCCCG	35	2.815755E-4	32.142742	17
GTATGCC	2915	0.0	32.10966	42
ATCTCGT	2895	0.0	32.09833	37
TATGCCG	2920	0.0	32.05468	43
CACGAGA	2935	0.0	31.890856	21
CTCGTAT	2915	0.0	31.878103	39
GTATCTC	2895	0.0	31.865171	35
CGAGACT	2910	0.0	31.778238	23
TCTCGTA	2930	0.0	31.714905	38
CCACGAG	2945	0.0	31.706171	20
ACGAGAC	2965	0.0	31.568184	22
TATCTCG	2945	0.0	31.55337	36
AGACTCA	2915	0.0	31.492168	25
GAGACTC	2940	0.0	31.45397	24