H23LNBCXX_l01n01_bir_1228_pb_69.351000000427ff.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_69.351000000427ff.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	198948
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGTC	20900	10.505257655266703	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCGT	3540	1.7793594306049825	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCAACTGTATCTCGTATGCCG	1709	0.859018436978507	No Hit
GATACCACCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCG	467	0.23473470454591147	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCG	466	0.23423206063896093	No Hit
GATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGA	429	0.21563423608179025	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCGA	391	0.19653376761766894	No Hit
TGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG	268	0.13470856706275006	No Hit
TTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACCTGTCTCTTATAC	262	0.1316927036210467	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	228	0.11460281078472766	No Hit
ATACCACTGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCG	201	0.10103142529706256	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2260	44.3031	45
ATGCCGT	2595	38.410408	44
CTCGTAT	2800	35.758926	39
TATCTCG	2800	35.758926	36
ATCTCGT	2815	35.64831	37
ACTGTAT	2810	35.63167	32
TCGTATG	2805	35.614975	40
CGTATGC	2810	35.5516	41
TATGCCG	2810	35.5516	43
TCTCGTA	2825	35.44248	38
GTATGCC	2820	35.425533	42
GTATCTC	2820	35.425533	35
AACTGTA	2845	35.19332	31
CTCAACT	2835	35.15873	28
GACTCAA	2840	35.09683	26
AGACTCA	2850	34.973686	25
ACTCAAC	2850	34.973686	27
CCACGAG	2870	34.965157	20
CGAGACT	2860	34.93007	23
TCAACTG	2865	34.86911	29