H23LNBCXX_l01n01_bir_1228_pb_6.35100000042005.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_6.35100000042005.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27163
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGTC	6467	23.808121341530757	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGT	648	2.385598056179362	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCG	138	0.5080440304826418	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCG	45	0.16566653167912232	No Hit
GAATAAAATACTTAGGAACAAATTTAATGAAAGCAGCGCATACAAGACTTG	40	0.14725913927033096	No Hit
GATAAACATATCTTTCGAGGAGTTTTATCTAGTATACGTACATTCTTCTCT	38	0.13989618230681442	No Hit
ACACATTTTTTATTCAAAGTTTTCCAACATCGGTAATCTCGAAAAATCAAA	36	0.13253322534329787	No Hit
ACATTCATTATAATCTGGCTGAATTAATTGCTGAAGCAAAGGATAAAAATA	31	0.1141258329345065	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	720	44.0625	45
ATGCCGT	780	40.673077	44
AGCCCAC	805	39.968945	17
ATGCGTT	805	39.968945	30
GAGCCCA	805	39.968945	16
CTCCGAG	805	39.968945	12
CAATGCG	800	39.9375	28
CCCACGA	800	39.9375	19
ACGAGAC	800	39.9375	22
TCTCCGA	800	39.9375	11
AATGCGT	800	39.9375	29
ACAATGC	800	39.9375	27
CGAGACA	795	39.905663	23
GTTATCT	795	39.905663	34
GCCCACG	810	39.72222	18
CGAGCCC	810	39.72222	15
CCGAGCC	810	39.72222	14
CGTTATC	805	39.68944	33
ATCTCCG	805	39.68944	10
CACATCT	805	39.68944	7