H23LNBCXX_l01n01_bir_1228_pb_56.35100000042650.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_56.35100000042650.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	202657
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGTC	2082	1.0273516335483106	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGT	774	0.38192611160729706	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCG	473	0.23339929042668156	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	299	0.14753993200333568	No Hit
AAGGAATGTGACAATAACGCAAGAAACCTGTCTCTTATACACATCTCCGAG	263	0.1297759268122986	No Hit
GCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCTGTCTCTTATACA	241	0.1189201458622204	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	239	0.11793325668494056	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTGTCTCTTATACA	217	0.10707747573486236	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	200	0.0	43.871872	45
CCTGAGT	25	0.00210376	35.997433	8
ATGCCGT	265	0.0	33.110847	44
ACTATTC	35	2.8134152E-4	32.140564	23
TGAGGTT	35	2.8134152E-4	32.140564	5
TATGCCG	290	0.0	30.256464	43
TCCTGAG	30	0.0051391674	29.99786	7
TATCTCG	300	0.0	29.247915	36
CGAGACG	300	0.0	29.247915	23
CCACGAG	300	0.0	29.247915	20
ACGATCG	305	0.0	28.775541	27
ACGAGAC	305	0.0	28.76844	22
GAGACGA	310	0.0	28.311419	24
CGATCGT	310	0.0	28.311419	28
GCCCACG	310	0.0	28.304436	18
GATCGTG	315	0.0	27.86203	29
CGTGTAT	320	0.0	27.426685	32
ATCTCGT	320	0.0	27.419918	37
AGCCCAC	320	0.0	27.419918	17
CCCACGA	320	0.0	27.419918	19