H23LNBCXX_l01n01_bir_1228_pb_51.351000000425bd.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_51.351000000425bd.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	141895
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGTC	3752	2.644208745903661	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	510	0.35942069840374924	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGT	377	0.2656894182317911	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	326	0.22974734839141617	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	316	0.22269988371683286	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	313	0.22058564431445787	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	295	0.2079002079002079	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	226	0.159272701645583	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA	206	0.14517777229641635	No Hit
TATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAA	205	0.14447302582895802	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	198	0.13953980055674972	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	195	0.1374255611543747	No Hit
GAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	178	0.12544487120758308	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	175	0.12333063180520808	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAA	156	0.10994044892349977	No Hit
GGTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	142	0.10007399837908312	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	395	43.289104	45
ATGCCGT	410	41.705357	44
CGTATGC	420	40.71237	41
GTATGCC	420	40.71237	42
CTCGTAT	415	40.66074	39
CGATCGT	415	40.66074	28
TATGCCG	425	40.233402	43
CCCACGA	425	40.233402	19
CGAGACG	425	40.233402	23
ACGAGAC	425	40.233402	22
CCACGAG	425	40.233402	20
TATCTCG	420	40.17668	36
GATCGTG	415	40.118595	29
TCGTGTA	415	40.118595	31
CGTGTAT	415	40.118595	32
GAGACGA	430	39.765575	24
AGACGAT	425	39.704018	25
ACGATCG	425	39.704018	27
GTATCTC	425	39.704018	35
ATCGTGT	420	39.640995	30