H23LNBCXX_l01n01_bir_1228_pb_44.351000000424d8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_44.351000000424d8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	256599
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCGT	7264	2.830876192035043	No Hit
CTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCGTC	6041	2.354257031399187	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAGATATAAATCTCGTATGCCG	2367	0.922450983830802	No Hit
AAAAAGGCTTTGGAAAATATCAACTCCCGTCTTCGTCTTGTTATGAAGAGT	391	0.15237783467589508	No Hit
AAGGAATGTGACAATAACGCAAGAAACCTGTCTCTTATACACATCTCCGAG	318	0.12392877602796581	No Hit
GTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAACCATAC	278	0.10834025074142922	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCGGA	20	7.019284E-4	45.004875	28
GGCTAGT	25	3.879825E-5	45.004875	6
GCCGTCT	555	0.0	44.590733	16
CCGTCTT	575	0.0	42.25721	17
TGCTTGA	585	0.0	40.388992	25
CTGCTTG	575	0.0	40.308712	24
GCTTGAA	575	0.0	40.308712	26
CTTCTGC	595	0.0	40.080563	21
TCTGCTT	590	0.0	39.65758	23
CGTCTTC	610	0.0	39.463795	18
ACGGGAC	30	1.13672635E-4	37.50406	3
CTTGAAA	645	0.0	36.631874	27
TTCTGCT	665	0.0	35.18492	22
TGAAAAA	715	0.0	33.674976	29
ACTTCTC	35	2.8125246E-4	32.14634	33
GCTAGTT	35	2.8157444E-4	32.14007	7
GTCTTCT	750	0.0	32.09722	19
TTGAAAA	755	0.0	31.890871	28
TTGGCTA	30	0.005137173	30.003248	4
CCGATCT	30	0.0051420727	29.9974	14