H23LNBCXX_l01n01_bir_1228_pb_15.3510000004213b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pb_15.3510000004213b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	216832
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCGTC	87431	40.32200044273908	No Hit
TCTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCGT	53999	24.903612012987015	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCG	5220	2.4073937426210152	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCG	394	0.18170749704840614	No Hit
TTATACACATCTCCGAGCCCACGAGACATAGACAAATCTCGTATGCCGTCT	241	0.11114595631641086	RNA PCR Primer, Index 13 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGGACC	20	7.0218544E-4	44.998386	38
TGCCGTC	9115	0.0	44.677498	45
GCCGTCT	55	2.728484E-9	36.81686	45
ATAGTGG	25	0.0021013368	36.007015	6
ACTCGTA	25	0.002103718	35.998707	38
TAGTGGT	25	0.002103718	35.998707	7
TAACTTA	25	0.002103718	35.998707	9
TCTTATA	7685	0.0	33.33233	1
GATTCCA	30	0.0051274737	30.012768	1
TGTACAC	30	0.0051332638	30.005846	3
GCAAAGT	30	0.0051390585	29.998926	16
GTTAGTT	30	0.0051390585	29.998926	30
TGGTTAT	30	0.0051390585	29.998926	19
TTGACTT	30	0.0051390585	29.998926	32
TCAGAGC	30	0.0051390585	29.998926	13
CGAGCCA	30	0.0051390585	29.998926	15
GATTAAA	30	0.0051390585	29.998926	11
CAGAGCC	30	0.0051390585	29.998926	14
ATGCCGG	45	3.4787816E-5	29.998924	45
CTGAAAT	40	6.151177E-4	28.123991	9