H23LNBCXX_l01n01_bir_1228_pa_96.35100000041f4d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pa_96.35100000041f4d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3467
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGTC	296	8.537640611479667	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCGT	14	0.4038073262186328	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAGCAGCAATCTCGTATGCCG	13	0.37496394577444475	No Hit
CTTATACACATCTCCGAGCCCACGAGACCATCAGCATCTCGTATGCCGTCT	6	0.17306028266512835	RNA PCR Primer, Index 18 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	20	6.0995086E-4	45.000004	17
GTATGCC	20	6.0995086E-4	45.000004	42
AATCTCG	20	6.0995086E-4	45.000004	36
ATCTCGT	20	6.0995086E-4	45.000004	37
ATCTCCG	20	6.0995086E-4	45.000004	10
CACATCT	20	6.0995086E-4	45.000004	7
CAGCAGC	20	6.0995086E-4	45.000004	29
CAGCAAT	20	6.0995086E-4	45.000004	32
TATACAC	20	6.0995086E-4	45.000004	3
TGCCGTC	20	6.0995086E-4	45.000004	45
CCAGCAG	20	6.0995086E-4	45.000004	28
CCACGAG	20	6.0995086E-4	45.000004	20
TATGCCG	20	6.0995086E-4	45.000004	43
CATCTCC	20	6.0995086E-4	45.000004	9
CAATCTC	20	6.0995086E-4	45.000004	35
GAGCCCA	20	6.0995086E-4	45.000004	16
CACGAGA	20	6.0995086E-4	45.000004	21
CCCACGA	20	6.0995086E-4	45.000004	19
ACATCTC	20	6.0995086E-4	45.000004	8
TACACAT	20	6.0995086E-4	45.000004	5