H23LNBCXX_l01n01_bir_1228_pa_60.35100000041ac8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pa_60.35100000041ac8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	348810
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTGATTAAATCTCGTATGCCGTC	45182	12.953183681660501	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTGATTAAATCTCGTATGCCGT	10701	3.067859293024856	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTGATTAAATCTCGTATGCCG	3202	0.9179782689716466	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	1519	0.43548063415613086	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	1047	0.3001634127461942	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	956	0.2740747111608039	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGT	625	0.1791806427568017	No Hit
CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA	616	0.17660044150110377	No Hit
GATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTT	540	0.15481207534187666	No Hit
GCTAAATACTCCTGACTGACCGATAGTGAACCAGTACCTGTCTCTTATACA	505	0.14477795934749577	No Hit
GTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCA	494	0.14162438003497607	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACCTGTCTCTT	473	0.13560391043834752	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTGTCTCTTATACA	460	0.13187695306900604	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	434	0.1244230383303231	No Hit
CCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCAT	424	0.12155614804621427	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACTGTCTCTTA	361	0.10349473925632866	No Hit
TAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCCGG	356	0.10206129411427425	No Hit
GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGT	349	0.10005447091539807	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	4585	44.55508	45
ATGCCGT	5725	35.643673	44
TATGCCG	6095	33.442997	43
GTATGCC	6130	33.28875	42
CGTATGC	6110	33.28725	41
AATCTCG	6095	33.258434	36
CTCGTAT	6100	33.23117	39
TGATTAA	6135	33.22971	30
ATCTCGT	6095	33.22152	37
CTGATTA	6130	33.22011	29
GACCTGA	6130	33.22011	26
TTAAATC	6140	33.166004	33
CCTGATT	6140	33.166004	28
ATTAAAT	6155	33.158295	32
TCGTATG	6115	33.14966	40
CACGAGA	6165	33.141006	21
CGAGACC	6190	33.04351	23
ACGAGAC	6190	33.04351	22
GATTAAA	6190	33.04351	31
GAGACCT	6170	33.004745	24