H23LNBCXX_l01n01_bir_1228_pa_53.351000000419f0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pa_53.351000000419f0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	149914
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGTC	30275	20.19491174940299	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCGT	17659	11.779420200915192	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGATCGTGTATCTCGTATGCCG	2148	1.4328214843176754	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	421	0.28082767453339913	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	357	0.23813653161145723	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	297	0.1981135851221367	No Hit
CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA	233	0.15542244220019477	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	223	0.14875195111864137	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	195	0.13007457609029174	No Hit
GCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATA	182	0.12140293768427232	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	166	0.11073015195378684	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	157	0.10472670998038876	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA	156	0.10405966087223342	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	152	0.10139146443961206	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	3355	0.0	44.458874	45
GCCGTCT	40	1.5526683E-5	33.7465	45
AAAGAGT	30	0.0051190224	30.016909	6
GAGAGTG	30	0.0051357634	29.996887	7
ATGCCGT	5140	0.0	29.019361	44
ATCTCGT	5355	0.0	27.854254	37
TATCTCG	5355	0.0	27.81224	36
TCTCGTA	5355	0.0	27.81224	38
CGTGTAT	5355	0.0	27.81224	32
GTATCTC	5340	0.0	27.8061	35
CTCGTAT	5365	0.0	27.802332	39
CGATCGT	5385	0.0	27.78263	28
TCGTGTA	5365	0.0	27.760399	31
ACGATCG	5390	0.0	27.756859	27
GATCGTG	5375	0.0	27.75061	29
TGTATCT	5375	0.0	27.75061	34
TATGCCG	5390	0.0	27.71512	43
GTATGCC	5390	0.0	27.71512	42
ATCGTGT	5375	0.0	27.708754	30
GTGTATC	5375	0.0	27.708754	33