H23LNBCXX_l01n01_bir_1228_pa_1.35100000041362.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_1228_pa_1.35100000041362.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	335600
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGTC	6970	2.0768772348033373	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAATGCGTTATCTCGTATGCCGT	1009	0.30065554231227654	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	969	0.2887365911799762	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	494	0.1471990464839094	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	456	0.13587604290822408	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	416	0.12395709177592373	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCAC	350	0.10429082240762813	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	345	0.10280095351609059	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	890	36.404255	45
TCGTATG	935	34.411533	40
CGTTATC	940	34.228497	33
TATCTCG	935	34.170895	36
AATGCGT	930	34.112675	29
GCGTTAT	940	33.989136	32
ATGCCGT	950	33.8682	44
CGTATGC	955	33.690876	41
CTCGTAT	950	33.63136	39
CACGAGA	950	33.63136	21
CCCACGA	950	33.63136	19
ATGCGTT	950	33.63136	30
GTATGCC	970	33.40184	42
CGAGACA	950	33.394516	23
GTTATCT	965	33.341747	34
TATGCCG	970	33.169884	43
TGCGTTA	965	33.108585	31
AGACAAT	960	33.046654	25
ATCTCGT	970	32.937927	37
GAGACAA	970	32.937927	24