H23LNBCXX_l01n01_bir_0120_pe_95.3510000004731f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pe_95.3510000004731f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72289
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTC	22870	31.63690187995407	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGT	1915	2.649089073026325	No Hit
TTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCT	748	1.034735575260413	No Hit
ATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTTC	467	0.6460180663724772	TruSeq Adapter, Index 7 (95% over 22bp)
CTCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCG	450	0.6225013487529223	No Hit
TATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTT	198	0.2739005934512858	RNA PCR Primer, Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2540	0.0	42.161465	45
CCGTCTT	45	1.8872015E-8	39.99631	44
ATGCCGT	2750	0.0	38.94186	44
CGTATGC	2820	0.0	37.975216	41
AGCCCAC	2815	0.0	37.96275	17
CTCGTAT	2810	0.0	37.950233	39
TCGTATG	2810	0.0	37.950233	40
TCTCGTA	2795	0.0	37.912422	38
TATGCCG	2820	0.0	37.895435	43
GTATGCC	2820	0.0	37.895435	42
ATCTCGT	2800	0.0	37.84472	37
CGAGCCC	2825	0.0	37.82837	15
ACGAGAC	2825	0.0	37.82837	22
CCTAGGT	2785	0.0	37.806206	28
CTAGGTT	2785	0.0	37.806206	29
GACCTAG	2785	0.0	37.806206	26
ACCTAGG	2780	0.0	37.793278	27
TCATCTC	2805	0.0	37.777264	35
CACGAGA	2835	0.0	37.774296	21
CCCACGA	2835	0.0	37.774296	19