H23LNBCXX_l01n01_bir_0120_pe_91.35100000047297.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pe_91.35100000047297.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55427
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTC	17713	31.957349306294763	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGT	1552	2.8000793836938676	No Hit
TTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCT	547	0.9868836487632381	No Hit
ATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTTC	418	0.7541450917422917	TruSeq Adapter, Index 7 (95% over 22bp)
CTCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCG	349	0.6296570263589947	No Hit
TATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTCTT	157	0.28325545311851624	RNA PCR Primer, Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1875	40.32	45
ATGCCGT	2070	36.52174	44
TATGCCG	2080	36.346157	43
CGTATGC	2085	36.258995	41
GTATGCC	2085	36.258995	42
CCGAGCC	2085	36.258995	14
ATCTCGT	2080	36.237984	37
CATCTCG	2080	36.237984	36
TCTCGTA	2080	36.237984	38
TCGTATG	2080	36.237984	40
CTCGTAT	2085	36.15108	39
TCATCTC	2085	36.15108	35
TTCATCT	2080	36.12981	34
CGAGCCC	2095	36.08592	15
TCCGAGC	2105	36.021378	13
GAGCCCA	2100	35.999996	16
AGCCCAC	2090	35.956936	17
CTCCGAG	2110	35.936016	12
CCTAGGT	2085	35.935253	28
TAGGTTC	2085	35.935253	30