H23LNBCXX_l01n01_bir_0120_pe_89.35100000047254.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pe_89.35100000047254.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6400
Sequences flagged as poor quality	0
Sequence length	51
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGTC	1567	24.484375	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCGT	235	3.671875	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTAGGTTCATCTCGTATGCCG	153	2.390625	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	190	43.81579	45
ATGCCGT	220	37.840908	44
AGCCCAC	250	33.3	17
GTATGCC	250	33.3	42
GCCCACG	250	33.3	18
CCACGAG	250	33.3	20
TATGCCG	250	33.3	43
CATCTCG	250	33.3	36
GAGCCCA	250	33.3	16
GTTCATC	250	33.3	33
CACGAGA	250	33.3	21
GGTTCAT	250	33.3	32
CCCACGA	250	33.3	19
CTAGGTT	250	33.3	29
ACGAGAC	250	33.3	22
CGTATGC	250	33.3	41
CGAGCCC	250	33.3	15
CCGAGCC	250	33.3	14
AGGTTCA	250	33.3	31
TCGTATG	250	33.3	40