H23LNBCXX_l01n01_bir_0120_pe_30.35100000046b0d.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pe_30.35100000046b0d.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	217604
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGTGTGCATCTCGTATGCCGTC	9330	4.287605007260896	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGTGTGCATCTCGTATGCCGT	1082	0.4972335067370085	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	429	0.19714711126633702	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCGTGTGCATCTCGTATGCCG	373	0.1714122902152534	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	313	0.14383926766052096	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	307	0.1410819654050477	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	301	0.13832466314957448	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	268	0.12315950074447161	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	233	0.10707523758754435	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	960	0.0	43.35937	45
ATGCCGT	1090	0.0	38.188072	44
CGTGTGC	1115	0.0	36.726456	30
CTCGTGT	1130	0.0	36.43805	28
TCGTGTG	1130	0.0	36.43805	29
TATGCCG	1145	0.0	36.35371	43
GACTCGT	1145	0.0	36.35371	26
ACTCGTG	1135	0.0	36.27753	27
GTGTGCA	1130	0.0	36.238937	31
ATCTCGT	1145	0.0	36.157204	37
CGTTCTG	25	0.0021033648	36.0	9
CCCGTTA	25	0.0021033648	36.0	29
CACGAGA	1145	0.0	35.960697	21
CCACGAG	1145	0.0	35.960697	20
AGACTCG	1160	0.0	35.88362	25
CGTATGC	1160	0.0	35.88362	41
ACGAGAC	1155	0.0	35.844154	22
CATCTCG	1150	0.0	35.804348	36
GCATCTC	1145	0.0	35.76419	35
CTCGTAT	1160	0.0	35.689655	39