H23LNBCXX_l01n01_bir_0120_pd_93.351000000466e6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_93.351000000466e6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	45769
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	1838	4.01581856715244	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	214	0.4675653826826017	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	198	0.4326072232296969	No Hit
ATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTTC	136	0.2971443553496908	Illumina PCR Primer Index 7 (95% over 22bp)
TTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCT	127	0.2774803906574319	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	79	0.17260591229871747	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	79	0.17260591229871747	No Hit
CATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	74	0.16168148746968472	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	71	0.15512683257226506	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	67	0.14638729270903889	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	56	0.12235355808516682	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	55	0.12016867311936026	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	49	0.10705936332452096	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	49	0.10705936332452096	No Hit
GTACGGGGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGA	48	0.10487447835871441	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	345	36.52085	45
CCCACGA	365	33.903286	19
GTATGCC	380	33.74918	42
TATGCCG	380	33.74918	43
CTGGATA	380	33.74918	30
TGGATAA	380	33.74918	31
CTCGTAT	380	33.74918	39
CCTGGAT	380	33.74918	29
AGACCCT	375	33.599182	25
GAGACCC	375	33.599182	24
AGCCCAC	370	33.445133	17
GCCCACG	370	33.445133	18
CACGAGA	370	33.445133	21
CGAGACC	370	33.445133	23
GGATAAT	385	33.31088	32
TCTCGTA	385	33.31088	38
CGTATGC	385	33.31088	41
CCACGAG	375	32.9992	20
ATCTCGT	390	32.883816	37
GATAATC	390	32.883816	33