H23LNBCXX_l01n01_bir_0120_pd_89.35100000046653.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_89.35100000046653.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24912
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	6927	27.80587668593449	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	597	2.3964354527938343	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCT	256	1.0276172125883107	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	211	0.8469813744380219	No Hit
ATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTTC	71	0.28500321130378936	Illumina PCR Primer Index 7 (95% over 22bp)
TATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCTT	39	0.15655105973025046	Illumina PCR Primer Index 7 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	755	40.23179	45
TCCGAGC	800	37.96875	13
CTCCGAG	800	37.96875	12
GCCCACG	805	37.73292	18
CCACGAG	805	37.73292	20
TATGCCG	805	37.73292	43
GAGCCCA	805	37.73292	16
CACGAGA	805	37.73292	21
CCCACGA	805	37.73292	19
ACGAGAC	805	37.73292	22
CTGGATA	805	37.73292	30
CGTATGC	805	37.73292	41
TCGTATG	805	37.73292	40
TCTCCGA	805	37.73292	11
CGAGACC	805	37.73292	23
CTCGTAT	805	37.73292	39
GAGACCC	805	37.73292	24
AATCTCG	800	37.6875	36
ATCTCGT	800	37.6875	37
TCTCGTA	800	37.6875	38