H23LNBCXX_l01n01_bir_0120_pd_61.351000000462dd.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_61.351000000462dd.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63319
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	2441	3.8550829924667163	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGT	474	0.7485904704748969	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	192	0.3032265196860342	No Hit
TTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTCT	165	0.2605852903551857	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	136	0.21478545144427422	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	121	0.1910958795938028	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	103	0.1626683933732371	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	103	0.1626683933732371	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	93	0.14687534547292283	No Hit
CATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	72	0.11370994488226283	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	285	39.47299	45
CCCACGA	355	31.689587	19
CCACGAG	355	31.689587	20
CGAGACC	355	31.055794	23
GCCCACG	365	30.821375	18
CACGAGA	365	30.821375	21
CGAGCCC	380	30.788935	15
ATCTCGT	360	30.624464	37
TAACCTA	125	30.599463	5
CGTATGC	370	30.404871	41
TATGCCG	370	30.404871	43
GTATGCC	370	30.404871	42
ATGCCGT	370	30.404871	44
ACGAGAC	370	30.404871	22
GAGACCA	375	29.999474	24
CCGAGCC	390	29.999474	14
AATCTCG	360	29.999474	36
CGAATCT	360	29.999474	34
GGCGAAT	345	29.999474	32
AGCCCAC	385	29.804672	17