H23LNBCXX_l01n01_bir_0120_pd_58.35100000046270.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_58.35100000046270.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	336995
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGTC	15853	4.70422409828039	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCGT	2775	0.823454353922165	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	1433	0.4252288609623288	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCA	732	0.21721390525081974	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	722	0.21424650217362276	No Hit
GCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGT	628	0.18635291324797104	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	618	0.18338551017077404	No Hit
CTATCATTAACTGAATCCATAGGTTAATGACTGTCTCTTATACACATCTCC	608	0.18041810709357706	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACCAC	608	0.18041810709357706	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGC	535	0.15875606463003902	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAAGGCGAATCTCGTATGCCG	530	0.15727236309144052	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGCTGTCTCTTATACACATCTCC	441	0.1308624757043873	No Hit
GCTTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATA	428	0.12700485170403122	No Hit
GTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAG	419	0.12433418893455393	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGCTGTCTCTTATACACATCT	378	0.11216783631804626	No Hit
CACTATCATTAACTGAATCCATAGGTTAATGACTGTCTCTTATACACATCT	339	0.100594964316978	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1630	0.0	43.064785	45
GTTAACG	60	1.546141E-10	37.49765	13
ATGCCGT	1915	0.0	36.655666	44
TAGGGGG	25	0.0021041143	36.003086	2
GCGAATC	1945	0.0	35.864258	33
CGAGACC	1965	0.0	35.837452	23
CGAATCT	1945	0.0	35.748566	34
GGCGAAT	1940	0.0	35.724712	32
TATGCCG	1965	0.0	35.60846	43
CGTATGC	1960	0.0	35.584503	41
CACGAGA	1980	0.0	35.565952	21
CCACGAG	1980	0.0	35.565952	20
TCGTATG	1960	0.0	35.469715	40
GAGACCA	1985	0.0	35.368275	24
ACGAGAC	1995	0.0	35.29854	22
CCCACGA	2000	0.0	35.210297	19
ATCTCGT	1975	0.0	35.200325	37
CTCGTAT	1975	0.0	35.200325	39
GCCCACG	2010	0.0	35.147053	18
CAAGGCG	1985	0.0	35.028194	29