H23LNBCXX_l01n01_bir_0120_pd_50.35100000046171.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_50.35100000046171.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	375355
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	34832	9.279748504748838	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGT	17260	4.598313596462016	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	1743	0.4643604054828096	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	1635	0.4355876436972999	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCG	1623	0.43239067016557664	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	983	0.2618854151403338	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	948	0.25256090900614087	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	760	0.2024749903424758	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	732	0.19501538543512142	No Hit
CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAA	554	0.1475936113812258	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	538	0.14333098000559472	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	524	0.1396011775519175	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTC	458	0.12201782312743936	No Hit
TTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTCT	392	0.1044344687029612	No Hit
CCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCTTATACAC	388	0.10336881085905342	No Hit
CATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTTT	378	0.10070466624928401	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCCCC	25	3.8870607E-5	44.997467	45
TGCCGTC	3485	0.0	43.51262	45
CGTCTTG	25	0.0021058866	35.997974	34
TAACCGA	25	0.0021058866	35.997974	23
TCTAACG	25	0.0021058866	35.997974	28
GCCGTCT	105	0.0	34.283787	45
CGGGGGG	35	2.81111E-4	32.153896	4
GGACCGT	35	2.81111E-4	32.153896	6
GACAATA	35	2.8177124E-4	32.14105	10
TTAACCG	35	2.8177124E-4	32.14105	22
ACCGAAT	30	0.0051443106	29.998312	25
CCGAATA	30	0.0051443106	29.998312	26
TGTCGAC	45	3.485987E-5	29.998312	33
GACTAGA	30	0.0051443106	29.998312	28
ATGCCGT	5395	0.0	28.149483	44
TATGCCG	5560	0.0	27.273645	43
ATCTCGT	5545	0.0	27.185123	37
TATCTCG	5545	0.0	27.185123	36
TCGTATG	5570	0.0	27.184288	40
CGTATGC	5580	0.0	27.175892	41