H23LNBCXX_l01n01_bir_0120_pd_20.35100000045dc9.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0120_pd_20.35100000045dc9.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	540853
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	8922	1.6496164392173103	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	1232	0.22778832695760218	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	1197	0.22131706766903392	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACACTGGGTT	1077	0.19912989296537137	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACA	958	0.17712761138423935	No Hit
TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACACCTGTCTCT	950	0.17564846640399517	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTTT	784	0.14495620806392864	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTC	716	0.1323834757318532	No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACA	705	0.13034965138401747	No Hit
CATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	691	0.12776114766859017	No Hit
CACAGCATGTGCATTTTTGTGTACGGGGCTGTCACCCTGTATCGCGCGCCT	683	0.126282002688346	No Hit
GTACGGGGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGA	674	0.12461796458557131	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	623	0.11518841533651474	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTCAGT	586	0.10834736980288545	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAA	561	0.10372504173962241	No Hit
CATATTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAAT	560	0.10354014861709189	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATG	552	0.10206100363684771	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1025	0.0	42.80277	45
ATGCCGT	1150	0.0	37.954647	44
GCCGTCT	30	1.1394537E-4	37.49815	45
TATGCCG	1195	0.0	36.525394	43
TCGTATG	1190	0.0	36.489796	40
TATCTCG	1190	0.0	36.30073	36
CGTATGC	1205	0.0	36.03557	41
GTGCGCA	25	0.002106634	35.998226	9
ATCTCGT	1205	0.0	35.848854	37
TCCTATC	1195	0.0	35.7756	33
CTCGTAT	1220	0.0	35.592506	39
GATCCTA	1215	0.0	35.557087	31
GTATGCC	1235	0.0	35.34239	42
CCTATCT	1230	0.0	35.303135	34
CACGAGA	1245	0.0	35.24248	21
CTAGATC	1215	0.0	35.186703	28
CCACGAG	1250	0.0	35.101513	20
TAGATCC	1220	0.0	35.042496	29
CCCACGA	1255	0.0	34.78238	19
ATCCTAT	1245	0.0	34.70029	32