H23LNBCXX_l01n01_bir_0113_pc_83.351000000459a4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_83.351000000459a4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	590360
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	6580	1.1145741581407953	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGT	873	0.14787587234907515	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCG	839	0.14211667457144792	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	820	38.411526	41
GTATGCC	830	38.2198	42
ATGCCGT	835	37.994156	44
CTCGTAT	830	37.948734	39
TCGTATG	845	37.27509	40
TATGCCG	860	36.886547	43
GCCCACG	870	36.203968	18
CGAGACT	880	35.792557	23
TGCCGTC	890	35.646202	45
ACTAAGC	865	35.635975	27
CCCACGA	885	35.59034	19
GATCTCG	875	35.48284	36
TCTCGTA	895	35.44406	38
AGCATGA	880	35.03151	31
GAGACTA	900	34.997166	24
GACTAAG	880	34.772858	26
CACGAGA	910	34.612583	21
CTAAGCA	905	33.815147	28
ACGAGAC	960	33.044205	22
GCATGAT	950	32.687103	32