H23LNBCXX_l01n01_bir_0113_pc_81.35100000045954.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_81.35100000045954.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16366
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTC	8154	49.82280337284614	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGT	735	4.491017964071856	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCG	329	2.0102651839178787	No Hit
TTATACACATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTCT	106	0.6476842233899548	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGCATGATTCGTATGCCGTCT	20	0.12220457045093486	No Hit
CTTATACACATCTCCGAGCCACGAGACTAAGCATGATCTCGTATGCCGTCT	18	0.10998411340584137	No Hit
CTTATACAATCTCCGAGCCCACGAGACTAAGCATGATCTCGTATGCCGTCT	17	0.10387388488329465	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGCATTATCTCGTATGCCGTC	17	0.10387388488329465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	925	42.324326	45
ATGCCGT	1015	38.571426	44
ATCTCCG	1035	38.26087	10
TCTCCGA	1040	38.076927	11
CCGAGCC	1035	38.04348	14
TCCGAGC	1035	38.04348	13
CTCCGAG	1035	38.04348	12
CGAGCCC	1020	37.941177	15
GAGCCCA	1030	37.79126	16
ACATCTC	1060	37.78302	8
CATCTCC	1055	37.748814	9
CCCACGA	1040	37.644234	19
AGCCCAC	1035	37.608696	17
GCCCACG	1035	37.608696	18
CTAAGCA	1055	37.535545	28
ACGAGAC	1050	37.499996	22
AGCATGA	1050	37.499996	31
CGAGACT	1050	37.499996	23
AGACTAA	1050	37.499996	25
GAGACTA	1050	37.499996	24