H23LNBCXX_l01n01_bir_0113_pc_78.351000000458f5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_78.351000000458f5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	343103
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTC	4383	1.2774589554740121	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	811	0.23637216812444078	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	737	0.21480430074933768	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGT	735	0.21422138541487543	No Hit
TACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTA	695	0.20256307872563048	No Hit
CCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATG	478	0.1393167649364768	No Hit
TTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTT	430	0.1253267969093829	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGATCCG	20	7.027259E-4	44.998833	28
TGCCGTC	440	0.0	40.90803	45
ATGCCGT	510	0.0	34.85204	44
GGACCAT	520	0.0	34.181805	32
TATGCCG	525	0.0	33.856266	43
GTATGCC	525	0.0	33.856266	42
GCCCACG	530	0.0	33.53687	18
CGTATGC	530	0.0	33.53687	41
CCCACGA	535	0.0	33.22344	19
ACGAGAC	535	0.0	33.22344	22
CTCGTAT	540	0.0	32.915813	39
CACGAGA	540	0.0	32.915813	21
CGAGACT	545	0.0	32.613834	23
CATCTCG	540	0.0	32.49916	36
TCGTATG	555	0.0	32.026196	40
TCTCGTA	550	0.0	31.908264	38
CTGGACC	550	0.0	31.908264	30
GACCATC	555	0.0	31.620802	33
ATCTCGT	580	0.0	30.645758	37
TGGACCA	570	0.0	30.393948	31