H23LNBCXX_l01n01_bir_0113_pc_71.35100000045811.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_71.35100000045811.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	233531
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC	22823	9.77300658156733	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGT	4010	1.7171167853518374	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCG	1088	0.46589103802064824	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	281	0.12032663757702404	No Hit
CCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATG	270	0.1156163421558594	No Hit
AACAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAG	245	0.10491112528957611	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	243	0.10405470794027345	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	2450	0.0	43.803204	45
ACCCGCT	30	1.1347179E-4	37.51357	6
ATGCCGT	2895	0.0	36.992355	44
CGCTATG	2990	0.0	36.04275	30
CCCGCAG	25	0.0021043671	35.9976	31
GCTATGA	2995	0.0	35.98258	31
CTCGCTA	3010	0.0	35.87801	28
ACTCGCT	3010	0.0	35.87801	27
AGACTCG	3040	0.0	35.81998	25
TATGCCG	2985	0.0	35.801636	43
GATCTCG	2985	0.0	35.801636	36
CGAGACT	3030	0.0	35.789696	23
GTATGCC	2990	0.0	35.741768	42
TCGCTAT	3025	0.0	35.7001	29
GACTCGC	3030	0.0	35.64119	26
ACGAGAC	3045	0.0	35.61339	22
TATGATC	3020	0.0	35.61021	33
GAGACTC	3055	0.0	35.57046	24
TGATCTC	3005	0.0	35.563354	35
CCCACGA	3045	0.0	35.539505	19