H23LNBCXX_l01n01_bir_0113_pc_66.3510000004577f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_66.3510000004577f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	196518
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGTC	3268	1.662951994219359	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	872	0.4437252567194862	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	857	0.4360923681291281	No Hit
TACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTA	738	0.37553811864562026	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCGCTATGATCTCGTATGCCGT	560	0.28496117404003707	No Hit
TTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTT	444	0.22593350227460082	No Hit
GTACGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA	216	0.10991359570115715	No Hit
CCTTAATCCTGTCCATTACTCCTTGATTCTCTTCTTCCACTGTTTTCACAT	199	0.10126298863208458	No Hit
CCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATG	197	0.10024527015337018	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	395	0.0	42.721516	45
TATGCCG	470	0.0	35.904255	43
GATCTCG	450	0.0	35.5	36
CGTATGC	470	0.0	35.425533	41
GTATGCC	480	0.0	35.156254	42
ATGCCGT	480	0.0	35.156254	44
ACTCGCT	480	0.0	34.687504	27
GACTCGC	480	0.0	34.687504	26
ATCTCGT	470	0.0	34.468086	37
CTCGTAT	470	0.0	34.468086	39
CTCGCTA	485	0.0	34.3299	28
CGCTATG	480	0.0	34.218754	30
TCGTATG	480	0.0	34.218754	40
TCTCGTA	475	0.0	34.105263	38
CGAGACT	490	0.0	33.97959	23
CTGTCCA	40	1.5540169E-5	33.75	9
CTATGAT	495	0.0	33.636364	32
GCCCACG	495	0.0	33.636364	18
GCTATGA	495	0.0	33.636364	31
CACGAGA	495	0.0	33.636364	21