H23LNBCXX_l01n01_bir_0113_pc_51.3510000004559b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_51.3510000004559b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	230580
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	4545	1.9711163153786107	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	616	0.26715239829993925	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCG	296	0.12837193165062016	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	283	0.12273397519299159	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	545	40.044716	45
ATGCCGT	555	39.32319	44
GACTACC	585	37.691216	26
CGTATGC	590	37.3718	41
CTACCGC	590	37.3718	28
TACCGCT	590	37.3718	29
TATGCCG	585	37.306614	43
GTATGCC	600	36.74894	42
CGAGACT	600	36.74894	23
ACTACCG	610	36.146496	27
ACCGCTG	615	35.85262	30
CCCACGA	615	35.85262	19
TCGTATG	610	35.777653	40
ACGAGAC	630	35.35612	22
GCCCACG	625	35.27898	18
CTCGTAT	620	35.200596	39
GCTGATC	620	34.837704	33
CACGAGA	645	34.533886	21
GATCTCG	620	34.474808	36
TCTCGTA	630	34.284725	38