H23LNBCXX_l01n01_bir_0113_pc_43.3510000004549c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_43.3510000004549c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	307787
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTGTGGACATCTCGTATGCCGTC	4701	1.5273549565121334	RNA PCR Primer, Index 20 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACCTGTGGACATCTCGTATGCCGT	522	0.16959780627511883	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	320	0.10396800384681615	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	645	39.069626	43
ATGCCGT	645	39.069626	44
CGTATGC	650	38.769093	41
GTATGCC	660	38.181683	42
CACGAGA	665	37.8946	21
TCGTATG	665	37.8946	40
GACATCT	655	37.786125	34
GTGGACA	665	37.556255	31
GGACATC	660	37.499866	33
CCCACGA	675	37.3332	19
TGGACAT	670	37.275986	32
CGAGACC	680	37.058693	23
CTCGTAT	675	36.999866	39
ACGAGAC	690	36.847694	22
TGCCGTC	685	36.78819	45
TGTGGAC	680	36.72781	30
TCTCGTA	680	36.72781	38
ACCTGTG	695	36.582603	27
GCCCACG	690	36.52161	18
ATCTCGT	685	36.459724	37