H23LNBCXX_l01n01_bir_0113_pc_40.3510000004543f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_40.3510000004543f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	232827
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGGATGTGATCTCGTATGCCGTC	1004	0.4312214648644702	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA	436	0.18726350466225997	No Hit
GAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCT	434	0.1864044977601395	No Hit
TACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTA	369	0.1584867734412246	No Hit
CCTTAATCCTGTCCATTACTCCTTGATTCTCTTCTTCCACTGTTTTCACAT	328	0.1408771319477552	No Hit
TTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTT	238	0.10222182135233455	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	150	0.0	35.997078	43
ATGCCGT	150	0.0	35.997078	44
TGCCGTC	150	0.0	35.997078	45
GCCCACG	155	0.0	34.83588	18
CCCACGA	150	0.0	34.4972	19
ATACCCG	40	1.5515388E-5	33.761765	5
CGTATGC	160	0.0	33.74726	41
GTATGCC	165	0.0	32.724617	42
AGACAGG	170	0.0	31.762127	25
CGCGCGC	45	3.480949E-5	29.997566	10
TCGCGCG	45	3.480949E-5	29.997566	9
CGAGACA	180	0.0	28.747667	23
CTCGTAT	190	0.0	28.418747	39
CTTAGAC	40	6.1310176E-4	28.14085	3
TACCCGG	40	6.138732E-4	28.134802	6
GGGGCAA	40	6.154184E-4	28.122717	18
GACAGCG	65	4.848753E-7	27.690062	7
CGCGCTT	65	4.848753E-7	27.690062	12
GACAGGA	195	0.0	27.69006	26
CACGAGA	190	0.0	27.234632	21