H23LNBCXX_l01n01_bir_0113_pc_30.351000000452fb.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_30.351000000452fb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	271165
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCATCAGACATCTCGTATGCCGTC	10167	3.7493776851732337	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCATCAGACATCTCGTATGCCGT	2597	0.9577194696955729	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCATCAGACATCTCGTATGCCG	418	0.15414968745966479	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1120	42.989483	45
ATGCCGT	1390	34.63901	44
GTATGCC	1435	33.709557	42
CGTATGC	1450	33.36084	41
TATGCCG	1450	33.36084	43
TCGTATG	1450	33.050507	40
GACATCT	1430	33.04074	34
CATCTCG	1455	32.62766	36
CTCGTAT	1475	32.33779	39
CCCACGA	1480	32.228542	19
TCTCGTA	1485	31.968517	38
AGACATC	1480	31.9245	33
GCCCACG	1495	31.905178	18
ACGAGAC	1500	31.798826	22
CGAGACC	1490	31.71024	23
CCATCAG	1505	31.693182	28
ATCTCGT	1500	31.648832	37
CCACGAG	1515	31.483988	20
CAGACAT	1510	31.439236	32
GACCATC	1540	31.118982	26