H23LNBCXX_l01n01_bir_0113_pc_2.35100000044f87.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pc_2.35100000044f87.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25325
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTC	13006	51.35636722606121	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	1408	5.5597235932872655	RNA PCR Primer, Index 44 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCG	548	2.1638696939782824	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	170	0.6712734452122409	RNA PCR Primer, Index 44 (95% over 23bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTCT	50	2.0008883E-11	45.051487	45
TGCCGTC	1395	0.0	43.27526	45
ATGCCGT	1555	0.0	38.8225	44
TCTCCGA	1610	0.0	37.84107	11
TCCGAGC	1620	0.0	37.746254	13
CTCCGAG	1615	0.0	37.723915	12
CCGAGCC	1625	0.0	37.63011	14
CGAGCCC	1610	0.0	37.5618	15
AGCCCAC	1615	0.0	37.445507	17
GCCCACG	1615	0.0	37.445507	18
GAGCCCA	1615	0.0	37.445507	16
CCCACGA	1615	0.0	37.445507	19
ATCTCCG	1635	0.0	37.39996	10
TATGCCG	1620	0.0	37.26481	43
ATCTCGT	1605	0.0	37.258606	37
TCTCGTA	1605	0.0	37.258606	38
TATCTCG	1605	0.0	37.258606	36
GTATGCC	1615	0.0	37.2407	42
CACGAGA	1630	0.0	37.174385	21
ACGAGAC	1630	0.0	37.174385	22