H23LNBCXX_l01n01_bir_0113_pb_77.35100000044ce7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pb_77.35100000044ce7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	176246
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTC	111935	63.510661234864905	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGT	13771	7.813510661234865	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCG	4607	2.6139600331355037	No Hit
TTATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTCT	696	0.39490257934931855	No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTGGACCATCTCGTATGCCGTC	352	0.199720844728391	No Hit
ATACACATCTCCGAGCCCACGAGACTCTGGACCATCTCGTATGCCGTCTTC	214	0.12142119537464681	Illumina PCR Primer Index 7 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	11545	44.25607	45
CCCTGGA	80	39.37202	28
ATGCCGT	13110	38.92154	44
GCCCACG	13630	37.51917	18
AGCCCAC	13655	37.516384	17
GAGCCCA	13675	37.51087	16
TCCGAGC	13675	37.51087	13
CCGAGCC	13670	37.508133	14
CGAGCCC	13665	37.505394	15
GAGACCC	90	37.49716	24
CCCACGA	13645	37.49441	19
TCTCGTA	13545	37.488857	38
CCATCTC	13550	37.47502	35
CCACGAG	13655	37.466957	20
ATCTCGT	13565	37.466755	37
CTCGTAT	13565	37.466755	39
ACGAGAC	13650	37.464195	22
CACGAGA	13670	37.45876	21
ACCATCT	13570	37.45295	34
TATGCCG	13625	37.433865	43