H23LNBCXX_l01n01_bir_0113_pb_6.3510000004440b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pb_6.3510000004440b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24546
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTC	12467	50.79035280697466	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	625	2.5462397131915586	RNA PCR Primer, Index 44 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCG	508	2.069583638882099	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	58	0.23629104538417664	RNA PCR Primer, Index 44 (95% over 23bp)
CTTATACACATCTCCGAGCCACGAGACCCTAGAATATCTCGTATGCCGTCT	33	0.1344414568565143	RNA PCR Primer, Index 44 (95% over 23bp)
CTTATACACATCTCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	26	0.10592357206876885	RNA PCR Primer, Index 44 (95% over 23bp)
CTTATACACATCCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	25	0.10184958852766234	RNA PCR Primer, Index 37 (95% over 21bp)
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCGTATGCCGTCTT	25	0.10184958852766234	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1365	42.527473	45
CTCCGAG	1450	41.27586	12
ATCTCCG	1465	41.160408	10
TCTCCGA	1460	41.147263	11
TCCGAGC	1445	41.107265	13
CCGAGCC	1450	40.965515	14
AGCCCAC	1440	40.9375	17
CCCACGA	1435	40.923347	19
GCCCACG	1430	40.909092	18
ATGCCGT	1420	40.880283	44
GAGCCCA	1455	40.82474	16
CGAGCCC	1445	40.79585	15
CATCTCC	1480	40.743244	9
ACGAGAC	1460	40.376713	22
CCACGAG	1470	40.255104	20
CACGAGA	1470	40.255104	21
TATCTCG	1450	40.03448	36
ATATCTC	1450	40.03448	35
AATATCT	1445	40.017303	34
GACCCTA	1480	39.98311	26