H23LNBCXX_l01n01_bir_0113_pb_54.351000000449f7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pb_54.351000000449f7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24166
Sequences flagged as poor quality	0
Sequence length	51
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	3960	16.38665894231565	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	189	0.7820905404287015	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCG	155	0.6413970040552843	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	435	43.448273	45
ATGCCGT	455	41.53846	44
TATGCCG	485	38.969074	43
GCCCACG	490	38.57143	18
CCCACGA	490	38.57143	19
CGCTGAT	485	38.505157	32
CACGAGA	485	38.505157	21
ATCTCGT	480	38.437496	37
TCTCGTA	480	38.437496	38
CGAGACT	475	38.36842	23
GAGACTA	475	38.36842	24
AGCCCAC	500	38.25	17
CGTATGC	495	38.181816	41
TCGTATG	495	38.181816	40
CCACGAG	490	38.112244	20
CCGCTGA	490	38.112244	31
CTCGTAT	490	38.112244	39
TGATCTC	485	38.041237	35
CTGATCT	485	38.041237	34
AGACTAC	475	37.894737	25