H23LNBCXX_l01n01_bir_0113_pb_5.351000000443e0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pb_5.351000000443e0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55009
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTC	12957	23.554327473686122	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCG	623	1.1325419476812886	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	575	1.0452834990637896	RNA PCR Primer, Index 44 (95% over 21bp)
TTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGTCT	82	0.14906651638822738	RNA PCR Primer, Index 44 (95% over 23bp)
GGTATCAACGCAGAGTACGGGGTGGTATCCTGTCTCTTATACACATCTCCG	75	0.1363413259648421	No Hit
GCTTATACACATCTCCGAGCCCACGAGACCCTAGAATATCTCGTATGCCGT	67	0.12179825119525896	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1535	42.942677	45
ATGCCGT	1590	41.457237	44
GCCCACG	1630	40.991962	18
ACGAGAC	1630	40.991962	22
GACCCTA	1645	40.8917	26
CCCACGA	1635	40.866604	19
CCACGAG	1630	40.853943	20
CACGAGA	1630	40.853943	21
ACCCTAG	1650	40.767784	27
CGAGACC	1640	40.742012	23
GAATATC	1635	40.729008	33
AGCCCAC	1650	40.63144	17
CCCTAGA	1650	40.63144	28
GAGACCC	1645	40.618176	24
AGAATAT	1640	40.604836	32
CTAGAAT	1640	40.604836	30
TAGAATA	1640	40.604836	31
ATATCTC	1625	40.564316	35
AGACCCT	1660	40.522198	25
GAGCCCA	1670	40.41426	16