H23LNBCXX_l01n01_bir_0113_pb_49.35100000044957.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pb_49.35100000044957.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	79684
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGTC	3725	4.674715124742733	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCGT	786	0.9863962652477285	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	176	0.22087244616234128	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	151	0.18949851915064506	No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	140	0.17569399126549873	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTACCGCTGATCTCGTATGCCG	138	0.17318407710456302	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	126	0.15812459213894886	No Hit
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	121	0.1518498067366096	No Hit
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	114	0.14306510717333468	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	110	0.13804527885146328	No Hit
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	104	0.13051553636865618	No Hit
GTATCAACGCAGAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	103	0.12926057928818835	No Hit
GGTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAA	93	0.11671100848350986	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	88	0.11043622308117064	No Hit
AAAAAAAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGA	85	0.10667135183976709	No Hit
GAGTACGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	83	0.10416143767883138	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTCTGTCTCTTATACACATCTCCGA	81	0.10165152351789568	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	430	0.0	41.33663	45
GCCGTCT	35	6.175973E-6	38.570892	45
ATGCCGT	515	0.0	34.95097	44
CGCTGAT	515	0.0	34.51408	32
ATCTCGT	510	0.0	34.411285	37
TCTCGTA	510	0.0	34.411285	38
ACCGCTG	520	0.0	34.182217	30
GCTGATC	520	0.0	34.182217	33
CTACCGC	520	0.0	34.182217	28
CTGATCT	520	0.0	34.182217	34
CTCGTAT	515	0.0	34.077194	39
ACTACCG	525	0.0	33.85667	27
GATCTCG	525	0.0	33.85667	36
TACCGCT	525	0.0	33.85667	29
CGTATGC	520	0.0	33.749527	41
GTATGCC	520	0.0	33.749527	42
TCGTATG	520	0.0	33.749527	40
CCGCTGA	530	0.0	33.53727	31
GAGACTA	530	0.0	33.53727	24
ACGAGAC	530	0.0	33.53727	22