H23LNBCXX_l01n01_bir_0113_pa_95.35100000044319.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pa_95.35100000044319.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21201
Sequences flagged as poor quality	0
Sequence length	51
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTC	3714	17.518041601811234	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGT	479	2.2593273902174427	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	114	0.5377104853544644	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCG	26	0.12263572472996558	No Hit
TTATACACATCTCCGAGCCCACGAGACCCTGGATAATCTCGTATGCCGTCT	23	0.10848544879958494	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	430	43.43023	45
CCACGAG	490	38.57143	20
GATAATC	490	38.57143	33
CACGAGA	490	38.57143	21
CCCACGA	490	38.57143	19
CTGGATA	490	38.57143	30
TGGATAA	490	38.57143	31
GACCCTG	490	38.57143	26
AGACCCT	490	38.57143	25
CCTGGAT	490	38.57143	29
GTATGCC	485	38.50515	42
AATCTCG	485	38.50515	36
ATAATCT	485	38.50515	34
TCTCGTA	485	38.50515	38
ATGCCGT	485	38.50515	44
CGTATGC	485	38.50515	41
TCGTATG	480	38.437504	40
CTCGTAT	480	38.437504	39
GCCCACG	495	38.181816	18
GAGCCCA	495	38.181816	16