H23LNBCXX_l01n01_bir_0113_pa_83.351000000441af.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pa_83.351000000441af.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	231672
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	13068	5.6407334507407025	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	5849	2.5246900790773164	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCG	1649	0.7117821747988535	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	441	0.1903553299492386	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	427	0.18431230360164372	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	407	0.1756794088193653	No Hit
GTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCAC	317	0.13683138229911254	No Hit
AAAAAGTACTCTGCGTTGATACCACCTGTCTCTTATACACATCTCCGAGCC	309	0.1333782243862012	No Hit
GGTATCAACGCAGAGTACTTTTTCTGTCTCTTATACACATCTCCGAGCCCA	300	0.1294934217341759	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACTGTCTCTTA	291	0.12560861908215062	No Hit
AAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGA	275	0.11870230325632791	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	267	0.11524914534341654	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1480	0.0	44.238163	45
TATAACG	30	1.1359223E-4	37.506653	2
ATGCCGT	2100	0.0	31.177374	44
TAACGCA	70	2.8603608E-8	28.933706	4
TATGCCG	2285	0.0	28.653166	43
GTATGCC	2300	0.0	28.466297	42
TATCTCG	2295	0.0	28.43028	36
CGTATGC	2305	0.0	28.404552	41
TCGTATG	2305	0.0	28.306942	40
ATAGAAC	40	6.144786E-4	28.129992	3
CTCGTAT	2325	0.0	28.06344	39
TCTCGTA	2325	0.0	28.06344	38
ATAATAT	2350	0.0	27.956373	32
TAATATC	2370	0.0	27.815386	33
CATAATA	2370	0.0	27.815386	31
CGAGACA	2355	0.0	27.80148	23
ATCTCGT	2355	0.0	27.705942	37
CAACATA	2380	0.0	27.698515	28
ACATAAT	2385	0.0	27.64045	30
ACGAGAC	2370	0.0	27.62552	22