H23LNBCXX_l01n01_bir_0113_pa_52.35100000043dcf.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pa_52.35100000043dcf.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268156
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	7677	2.8628857829024894	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGT	3079	1.1482122346693717	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCG	496	0.18496695953101927	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAAC	430	0.1603544205611659	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTTGATACC	288	0.10740017005026925	No Hit
AAAAAGTACTCTGCGTTGATACCCCGTACTCTGCGTTGATACCTGTCTCTT	282	0.10516266650755529	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	785	0.0	44.422333	45
CCCCCCG	25	0.0021052626	35.996418	42
CGGAGGT	35	2.8162939E-4	32.13966	19
ATGCCGT	1095	0.0	31.846148	44
TGTACAG	30	0.0051334314	30.008207	5
ACCTATC	1195	0.0	29.37494	33
GTATGCC	1195	0.0	29.369465	42
TATGCCG	1190	0.0	29.303808	43
TATCTCG	1195	0.0	29.181198	36
TCGTATG	1195	0.0	29.181198	40
CTCGTAT	1200	0.0	29.05961	39
CCTATCT	1210	0.0	28.824821	34
AACCTAT	1220	0.0	28.772995	32
CGTATGC	1220	0.0	28.767632	41
TCTCGTA	1215	0.0	28.70085	38
CGAGACG	1230	0.0	28.533745	23
TAACCTA	1235	0.0	28.423525	31
ACGAGAC	1235	0.0	28.418224	22
ATCTCGT	1230	0.0	28.350836	37
GACGATA	1250	0.0	28.26246	26