H23LNBCXX_l01n01_bir_0113_pa_32.35100000043b4b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pa_32.35100000043b4b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	218818
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTTGCAGAATCTCGTATGCCGTC	14269	6.520944346443162	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCTTGCAGAATCTCGTATGCCGT	3014	1.3774003966766903	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTTGCAGAATCTCGTATGCCG	500	0.2285003975906918	No Hit
TCTAAGGAGAGAGTTATAAAGATGGGAAAGAAGAAAACCTGTACTGTTAGA	297	0.13572923616887092	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCTA	20	7.011621E-4	45.011887	5
TGACTCG	20	7.011621E-4	45.011887	5
GCCTCTA	30	2.1568922E-6	45.001602	21
CGTATGG	20	7.0195243E-4	45.0016	22
CCGTATG	20	7.0195243E-4	45.0016	21
ACGGCAG	20	7.0195243E-4	45.0016	25
TACGACT	20	7.0195243E-4	45.0016	43
AGCGAGC	20	7.0195243E-4	45.0016	40
ATTGGAC	40	6.7702786E-9	45.0016	17
TGGTCAC	20	7.0195243E-4	45.0016	25
GTCGGTT	20	7.0195243E-4	45.0016	21
AGAGATC	20	7.0195243E-4	45.0016	20
AACCGTG	25	3.8848484E-5	44.991318	7
TAACGTC	20	7.0274353E-4	44.991314	15
GCTTCGA	20	7.0274353E-4	44.991314	45
CGCTACA	20	7.0274353E-4	44.991314	9
CCCCCCA	20	7.0274353E-4	44.991314	14
ACGCTAC	20	7.0274353E-4	44.991314	8
ACCCCCC	20	7.0274353E-4	44.991314	13
TGCCGTC	1445	0.0	43.434525	45