H23LNBCXX_l01n01_bir_0113_pa_1.3510000004375c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23LNBCXX_l01n01_bir_0113_pa_1.3510000004375c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	467526
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGTC	3876	0.8290448017864247	RNA PCR Primer, Index 27 (95% over 21bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1422	0.30415420746653665	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTC	1192	0.25495908248953003	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1072	0.2292920607623961	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATG	952	0.20362503903526222	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTTT	905	0.19357212219213477	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	799	0.1708995863331665	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGCC	718	0.15357434666735112	No Hit
CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCTCACA	663	0.14181029504241474	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAA	594	0.12705175754931275	No Hit
GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGTGTCCCGCC	560	0.11977943472662483	No Hit
TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGA	559	0.1195655428788987	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACACACTGATT	552	0.1180682999448159	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGT	544	0.11635716516300698	No Hit
GTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCA	527	0.112721003751663	No Hit
GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATA	496	0.10609035647215342	No Hit
GCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGC	471	0.10074306027900053	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	390	39.80306	45
ATGCCGT	430	36.100445	44
TATCTCG	445	34.883575	36
GCTATCT	450	34.507053	34
ATTGCTA	450	34.507053	31
ACGAATT	455	34.124207	27
ATCTCGT	460	33.74607	37
CCCACGA	465	33.38678	19
GTATGCC	465	33.38321	42
TATGCCG	470	33.02807	43
TCGTATG	470	33.02807	40
GGTATCA	2085	32.927444	1
CGAATTG	475	32.69089	28
TGCTATC	475	32.69089	33
CTCGTAT	475	32.680405	39
TTGCTAT	480	32.350365	32
GAGACGA	480	32.343445	24
CCGAGCC	480	32.339985	14
CTATCTC	490	31.686762	35
CCACGAG	490	31.683372	20