FastQCFastQC Report
Fri 4 Jun 2021
H222TAFX3_n02_vk13-18.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH222TAFX3_n02_vk13-18.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5886553
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG191150.3247231444276472No Hit
CGGGAAGGAATAAGAAGCAACTAAACGAGGGTGTAGAAAAAGACGAAGAG63160.10729539001857284No Hit
CGGGAAGAGATTTAGTATGTGGGACAGAATGTCGGCGGCAGTATTGAGAC61070.10374492508603932No Hit
TGGGGTGGTATAGTCCGCATTGGGATGTTACTTTCCTGTTATGGCATGGA59180.10053421756331762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)