FastQCFastQC Report
Wed 29 Jun 2022
temp_l01_n02_LC_CD029_Post_SC_Collection_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametemp_l01_n02_LC_CD029_Post_SC_Collection_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG55.05050505050505No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG44.040404040404041No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTGTTGGTCCAGGT44.040404040404041No Hit
CCTGTTCGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG33.0303030303030303No Hit
CCCGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA33.0303030303030303No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTTACAGTCCAGCA22.0202020202020203No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGG22.0202020202020203No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG22.0202020202020203No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG22.0202020202020203No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA22.0202020202020203No Hit
TACCGCGGCTGCTGGCACACAATTACCATACGAGACGTGTGAGGACATCG11.0101010101010102No Hit
CCTGTTTGCTACCCACGCTTTCGCGCTTTAGCGTCAGTATCTGTCCAGTA11.0101010101010102No Hit
CCTGTTTGCTCCCCACACTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGCACATGAGCGTCAGTACTTTCCCACGG11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCGAACCTCAGTGTCAGTTACAGACCAGAG11.0101010101010102No Hit
CCTGTTTGATACCCTCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC11.0101010101010102No Hit
TCTCTCTGCTCCTCACACTTTAGCGCCACAGCGTCAGTTACAGACCCGCA11.0101010101010102No Hit
CCTGTTTCCTCCCCACTCTTTCGCGCCTGAGCGTCAGCTATTTCCTCGGA11.0101010101010102No Hit
CCTGTTTGCTCCCCAAGCTTTCGCACCTCAGCGTCAGTATTAGGCCAGAT11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTGACGGCCCAGAG11.0101010101010102No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTCAGCGTCAGTTGCGCTCCCGTC11.0101010101010102No Hit
CCTATTATCTTCCCTATCTGTCCTTCCAGCGCGTCTTACACGGACTACTG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTGAGCGTCAGTTATGTCCCAGTA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCTGTTACAAGCCAGAG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGAA11.0101010101010102No Hit
CCTGTTTGATCCCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGG11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGCCCAGAG11.0101010101010102No Hit
CCTGTTTCCTACCCACGCTTACCAGCCTCAGCGTCAGTTACAGTCCTGTG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA11.0101010101010102No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTTTTAGGCCAGAT11.0101010101010102No Hit
CCCGTTCGCTCCCCTGGCTTTAGCGCCTCAGCGTCAGTTTTCTTCCAGAA11.0101010101010102No Hit
CCTGTTCGATACCCACGCTTTCGAGCTTCAGCGTCAGTTGCGCTACAGCA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTGCAAGCCAGAG11.0101010101010102No Hit
CCTGTTTGCTCCCCACACTTTCGAGCCTCAGCGTCAGTTACAGACCAGTG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACCAGCCAGAG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTGCGCACATGAGCGTCAGTACATTCCCAAGG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTGAGCGTCAGTTATGTCCCAGGA11.0101010101010102No Hit
CGACGCGGAGACTTACCCACAATTAACAGACGTTACGTATGAGTGTTCAA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAAGCCAGAG11.0101010101010102No Hit
CCTGTTCGCTCCCCATGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAG11.0101010101010102No Hit
CCCGTTCGCTCCCCTCGCTTTCGCGCCTCAGCGTCAGTGTTCGTCCAGAA11.0101010101010102No Hit
CCTGTTCGATACCCGCACCTTCGAGCCTAAGCGTCAGTTGCGCTCCCGTC11.0101010101010102No Hit
CCTGTTCGCTCCCCTAGCTTTCGCGCCTCAGCGTCAGTATCGGCCCAGCA11.0101010101010102No Hit
CCTGTTTGCTACCCACGCTTTCGTGCCTCAGTGTCAGTTACAGTCCAGAA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTATTGGCCCAGGG11.0101010101010102No Hit
CCTGTTTGCTCCCCCCGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGAC11.0101010101010102No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG11.0101010101010102No Hit
CCTGTTCGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTTTCGTCCAGAA11.0101010101010102No Hit
CCTGTTTTCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG11.0101010101010102No Hit
CCTGTTTGCTACCCACACTTTCGAGCCTCAGCGTCAGTTGGTGCCCAGTA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGTA11.0101010101010102No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAC11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCCGTCATCGTCCAGCA11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAG11.0101010101010102No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGCA11.0101010101010102No Hit
CCTGTTTGCTCCCCATGCTTTCGTACCTCAGCGTCAGTATTTGGCCAGAT11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCGTCCCTCAGCGTCAGTTGTATCTTAGTG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCATGAGCGTCAGTGTTATCCCAGGG11.0101010101010102No Hit
CCTGTTTGATACCCACGCTTTCGAGCCTCAATGTCAGTTGTAGCTTAGGA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGAA11.0101010101010102No Hit
CCTGTTCGCTCCCCACACTTTCGTCCCTCAGCGTCAGTTGTATCTTAGTG11.0101010101010102No Hit
CCTGTTCGCTACCCATGCTTTCGCACCAGCGCGTCCGTCTTTGTCCAGGT11.0101010101010102No Hit
CCTAATCTCTCCCCACTCTCGCCCGCCTCATATTCCTTTTTTTCCCCTCT11.0101010101010102No Hit
CCTGTTCGATACCCGCACCTTCGAGCTTAAGCGTCAGTTACACTCCCGTA11.0101010101010102No Hit
CCTGTTTGATACCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTC11.0101010101010102No Hit
CCTGTTTGCTCCCCATGCTTTCGCTTCTCAGCGTCAGTTACAGCCCAGAG11.0101010101010102No Hit
CCTGTTTGCTCCCCTAGCTTTCGCACCTCAGCGTCAGTATCGGGCCAGAT11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTTACAGCCCAGAG11.0101010101010102No Hit
CCTGTTCGATACCCTCACCTTCGAGCCTCAGCGTCAGTTGCTCTCCCGTC11.0101010101010102No Hit
CCTGTTCGATACCCGCGCTTTCGAGCTTCAGCGTCAGTAACGCTGCGGCA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTCAGTGTCAGTATTAGTCCAGGT11.0101010101010102No Hit
CCTGTTTGCTCCCCACTCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGAA11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCTCTCCTCAGCGTCAGTAACGGCCCAGTA11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCCTTCGCACCTGAACGTCAGTCTTCGTCCAGGG11.0101010101010102No Hit
CCTGTTCGCTCCCCACGCTTTCGATCCTCAGCGTCAGTTACAGACCAGAG11.0101010101010102No Hit
TACCGCGGCTGCTGGCACACAATTACCATACGAGACGTGTGTAGATATCG11.0101010101010102No Hit
CCTGTCCGCTACCCATGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAC11.0101010101010102No Hit
CCTGTTTGCTCCCCATGCTTTCGCACCTCAGTGTCAGTATTAGGCCAGAT11.0101010101010102No Hit
CCTCACCTCGTAAACACAGTGTCGTCGATATGCATCAAACCGCATACAAG11.0101010101010102No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACAGTCCAGTA11.0101010101010102No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)