FastQCFastQC Report
Wed 29 Jun 2022
temp_l01_n02_LC_CD002_FU8_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametemp_l01_n02_LC_CD002_FU8_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37630
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG1464338.913101249003454No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG1094429.083178315174063No Hit
CCTGTTTGCTACCCACGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAG37329.917618921073611No Hit
CCTGTTCGCTACCCATGCTTTCGAGTCTCAGCGTCAGTTGCAGACCAGGT31398.341748604836567No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGTCCAGAG3150.837098060058464No Hit
CCTGTTCGCTACCCATGCTTTCGAGTCTCAGCGTCAGTTGCAGACCAGAG2550.6776508105235185No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG2010.5341482859420675No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTAACGGCCCAGAG1790.47568429444592075No Hit
CCTGTTCGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGGT1790.47568429444592075No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG1740.462397023651342No Hit
CCTGTTCGCTACCCATGCTTTCGCGCCTCAGCGTCAGTTGCAGACCAGAG1490.39596066967844806No Hit
CCTGTTTGCTACCCACGCTTTCGAACCTCAGCGTCAGTTGCAGACCAGAG1130.30029231995748074No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGG1130.30029231995748074No Hit
CCTGTTCGCTACCCACGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAG990.26308796173266014No Hit
CCTGTTCGCTCCCCACGCTTTCGCTCCTCAGCGTCAGTTGCAGACCAGAG860.22854105766675525No Hit
CCTGTTCGCTACCCATGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG780.20728142439542918No Hit
CCTGTTCGCTACCCATGCTTTCGAACCTCAGCGTCAGTTACAGACCAGAG600.15944724953494552No Hit
CCTGTTTGCTACCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG580.15413234121711403No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGCGTCAGTTACAGACCAGAG490.13021525378687218No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTGAGCGTCAGTTACAGTCCAGCA490.13021525378687218No Hit
CCTGTTTGCTACCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG490.13021525378687218No Hit
CCTGTTCGCTCCCCATGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG480.12755779962795644No Hit
CCTGTTTGCTACCCACGCTTTCGAGCCTCAGCGTCAGTTGCAGACCAGAG450.11958543715120913No Hit
CCTGTTCGCTACCCACGCTTTCGCTCCTCAGCGTCAGTAACGGCCCAGAG430.11427052883337763No Hit
CCTGTTCGCTACCCATGCTTTCGCGTCTCAGCGTCAGTTGCAGACCAGGT380.10098325803879883No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)